Changes in version 1.5.2 - Z-score calculation is now only applied to markers not filtered by genotype probabilities and missing data - Markers filtered out during standardization are not considered to define the window boundaries for HMM CNV estimation - Last window of each chromosome are never smaller than the defined window size - CN HMM plots follow same scale for easier comparison between metrics by window Changes in version 1.5.1 - Fix HMM CNV estimation when some of the windows don't have heterozygous genotypes (use only z-score for them) - Improve Shiny interface for HMM CNV estimation Changes in version 1.5.0 - Add HMM to estimate CN (beta version) - Shiny interface improvements - Add CSV or TSV as possible input files Changes in version 1.1.0 - Beta version of Qploidy + BIGapp interface - Fix Bioconductor dependency call - Fix %>% call Changes in version 1.0.0 - First release - Functions improvements including comprehensive documentation - Vignette with functional simulated example - Testthat tests included - CRAN submission Changes in version 0.0.0.9000 - This is a beta version - Initial addition of functions - First version of the vignette